Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835852.1_cds_XP_016506068.1_19335
CDS Infomation

[gene=LOC107823879] [db_xref=GeneID:107823879] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016506068.1] [location=129869..131338] [gbkey=CDS]
Sequence

ATGTCAAGACAGGATAATGAAGATATGCATCAACGAATAATACCAAAAGTTCCATCATTC
ATGAGACTTAAGAACATGAGCGATGACTATGATCCTAAAGTCATGTCATTGGGGCCTTAC
CACCATGGAAAAAAAGAGCTCAAATTTGTTGAAGATTTCAAGCCCAAGGCTCTACAAATG
TTCATTGAAGGCAGTAATAAAGACTACAATTTCTTCCTCGAGAAAATTTTCGAGGAAATC
GAGCGTGCTAAAAGTTGTTACCTCGAAGAATTCACGAGTCAGTATAACGACGATTATTTT
GCTCGAATGATGCTCCTTGACGCGTGTATCGTTCTAATGGATATCGAGATAGTAACAGAG
TTTTCAAAGTCATGGGAAGTGAAATATTCATTCACAAAAGAACATCTTGGTGTAGCAGGT
TATTGTGCTGCTGCACATGACCTATATTTGCTTGAAAATCAGGTACCGTTTTGGATTCTC
AAACTCTTGTTTAATTTGAGATATGTTAAAGATGATATATCATTAACATATGATCATCAA
TTTGAGAATATAGTGCAATACTATTGTTCTTATCTTTGTTTCGGAGATCATCGATTATAC
AAAGAATATTGGGAAACAGAACCCCCTCACCTATTTGAAGTTTTCCGAAGAGAACTAATT
ATCTTTGGTGACAAAAATAAAGATGATTATCTTATGCAACAACGTCGTCATCATCATCAT
CATCAACCACCTGCTTCCAGCCTCAGTGGATCAGTTAGTGATCAATGGAAAAAGAAGGTA
CAAAACATGAAAAAAATTACTAATTCGCATATTAATTCGTGGTGCTTTGGTCGATATTGC
TGTATAAGGAAAAAAGGTCATCACAAACCAAAAACACCACGGTGTGTGTTTCGTTCGGTG
ATCGAGCTTAAATCAAAGGGCATTCATTTCAGGCCTAGCCGTGTGAATTCTTTCAATTGT
GGTGCAAAGTTTCACTCTCATTGTTACTATGCAGAACTCTGGCTTCCGCCTTGGTACGTT
TCATCGGTTACTAAAACAGCTCTGCAGAATATGATAGCTTATGAAATTTGTCCGAATAGC
GTAAATCATGGAGATATTTCTGTGACATCTTATATAAGTTTTATGAAAGCACTTATCACA
TCACCACAAGATGTGAAGGAGCTAAGAGAAAAGAAGATTATAATAAACTATTTGGGAAGT
GATGAAGAAGTTGTACAAGTTTTCAGATCAGTAAACACTTATGGGACAAGGGGTCAATCT
AGCTTTGATGAAATCAATTTTAAAATCAAAGAGCACTTTCACAGCAGGGTCAGAACTTGG
TTTGCTGAATTGCTAAATGCTTATTTTACAAGTCCCTGGTCTCTAATCACTTTGATTGCG
GCTACTTTCCTCCTTTTCCTTGCTATGGTCCAGGCCTTCTATGCATCTCCATTACATAAT
TTACATCCTTCTAAAAAATTCCGATATTGA

Peptide Sequence

PEP ID

XP_016506068.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MSRQDNEDMHQRIIPKVPSFMRLKNMSDDYDPKVMSLGPYHHGKKELKFVEDFKPKALQM
FIEGSNKDYNFFLEKIFEEIERAKSCYLEEFTSQYNDDYFARMMLLDACIVLMDIEIVTE
FSKSWEVKYSFTKEHLGVAGYCAAAHDLYLLENQVPFWILKLLFNLRYVKDDISLTYDHQ
FENIVQYYCSYLCFGDHRLYKEYWETEPPHLFEVFRRELIIFGDKNKDDYLMQQRRHHHH
HQPPASSLSGSVSDQWKKKVQNMKKITNSHINSWCFGRYCCIRKKGHHKPKTPRCVFRSV
IELKSKGIHFRPSRVNSFNCGAKFHSHCYYAELWLPPWYVSSVTKTALQNMIAYEICPNS
VNHGDISVTSYISFMKALITSPQDVKELREKKIIINYLGSDEEVVQVFRSVNTYGTRGQS
SFDEINFKIKEHFHSRVRTWFAELLNAYFTSPWSLITLIAATFLLFLAMVQAFYASPLHN
LHPSKKFRY

Transcript Sequence

Gene sequence data has not been registered.